Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 PCDHB17P-201ENST00000539533 2393 ntBASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AP000344.2-201ENST00000512987 629 ntBASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC112191.1-201ENST00000523689 701 ntBASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC107918.2-201ENST00000530817 355 ntBASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDND2Q8NHS1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 AC026691.1-201ENST00000602502 2017 ntBASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 HMGN1P19-201ENST00000436976 333 ntBASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDND2Q8NHS1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms