Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 FAAHP1-202ENST00000446499 1238 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AC087641.1-201ENST00000557561 1021 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AL691432.3-201ENST00000621860 400 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AC005593.1-201ENST00000624894 515 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AL122018.1-201ENST00000446607 2310 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 AL031731.1-201ENST00000642131 2094 ntBASIC15.28■□□□□ 0.04
LSMEM1Q8N8F7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 GGT4P-201ENST00000623672 1708 ntBASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 AC012640.2-201ENST00000561606 901 ntBASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.27■□□□□ 0.04
LSMEM1Q8N8F7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 MTHFR-217ENST00000641820 1569 ntBASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSMEM1Q8N8F7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 OR6D1P-203ENST00000641209 4860 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 AC004870.1-201ENST00000315132 882 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms