Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AC093724.1-201ENST00000448659 1027 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 PRYP6-201ENST00000514804 343 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AC105233.2-201ENST00000523697 349 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AF228730.5-201ENST00000530288 346 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 NKILA-202ENST00000614771 2598 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 KRT18P28-201ENST00000453838 1332 ntBASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.65■□□□□ 0.1
ARHGEF39Q8N4T4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ARHGEF39Q8N4T4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.64■□□□□ 0.1
ARHGEF39Q8N4T4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AC005237.2-201ENST00000434368 219 ntBASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AC109322.1-201ENST00000524499 1264 ntBASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
ARHGEF39Q8N4T4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 TSEN15P1-201ENST00000423257 515 ntBASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.63■□□□□ 0.09
ARHGEF39Q8N4T4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms