Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.22■□□□□ 0.35
SCML4Q8N228 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 AC011676.5-201ENST00000624864 2660 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 FAM220BP-201ENST00000377689 816 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 KRT18P32-201ENST00000424695 1287 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 SLC25A39P2-201ENST00000537614 270 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
SCML4Q8N228 SPTSSB-204ENST00000617024 1292 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCML4Q8N228 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
SCML4Q8N228 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 PCDHA12-202ENST00000613593 2588 ntBASIC17.22■□□□□ 0.35
SCML4Q8N228 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.21■□□□□ 0.35
SCML4Q8N228 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.21■□□□□ 0.35
SCML4Q8N228 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCML4Q8N228 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
SCML4Q8N228 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
SCML4Q8N228 UXT-AS1-201ENST00000590504 1525 ntBASIC17.21■□□□□ 0.34
SCML4Q8N228 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCML4Q8N228 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.34
SCML4Q8N228 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
SCML4Q8N228 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
SCML4Q8N228 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
SCML4Q8N228 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.2■□□□□ 0.34
SCML4Q8N228 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.2■□□□□ 0.34
SCML4Q8N228 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 AC092183.1-201ENST00000469884 875 ntBASIC17.2■□□□□ 0.34
SCML4Q8N228 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.2■□□□□ 0.34
SCML4Q8N228 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.2■□□□□ 0.34
SCML4Q8N228 AP001059.3-201ENST00000619053 235 ntBASIC17.2■□□□□ 0.34
SCML4Q8N228 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 UBALD1-205ENST00000590891 2641 ntBASIC17.2■□□□□ 0.34
SCML4Q8N228 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.2■□□□□ 0.34
SCML4Q8N228 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 AL589702.1-201ENST00000641229 1509 ntBASIC17.2■□□□□ 0.34
SCML4Q8N228 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SCML4Q8N228 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
SCML4Q8N228 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SCML4Q8N228 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 U82695.1-201ENST00000635752 1889 ntBASIC17.2■□□□□ 0.34
SCML4Q8N228 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms