Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL513477.1-201ENST00000602865 2407 ntBASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 NTF6B-201ENST00000591913 560 ntBASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 TERC-201ENST00000602385 541 ntBASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 DBET-201ENST00000630918 3363 ntBASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUDCD3Q8IVD9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUDCD3Q8IVD9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 MINOS1P3-201ENST00000457048 203 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 AC022616.7-201ENST00000525383 220 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 AL136038.3-201ENST00000561909 1096 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 AP000867.4-201ENST00000641616 219 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUDCD3Q8IVD9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms