Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 AL162726.2-201ENST00000438986 1017 ntBASIC20.56■□□□□ 0.88
COL23A1Q86Y22 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.56■□□□□ 0.88
COL23A1Q86Y22 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AP000812.2-201ENST00000538934 718 ntBASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AC133539.2-201ENST00000604757 467 ntBASIC20.55■□□□□ 0.88
COL23A1Q86Y22 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 BICD1-207ENST00000551848 1962 ntBASIC20.55■□□□□ 0.88
COL23A1Q86Y22 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL23A1Q86Y22 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 AL442647.2-201ENST00000429864 857 ntBASIC20.54■□□□□ 0.88
COL23A1Q86Y22 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL23A1Q86Y22 TUBB8P12-201ENST00000308911 1335 ntBASIC20.53■□□□□ 0.88
COL23A1Q86Y22 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 TUBB7P-202ENST00000428444 1305 ntBASIC20.53■□□□□ 0.88
COL23A1Q86Y22 TUBB8P7-204ENST00000567960 1332 ntBASIC20.53■□□□□ 0.88
COL23A1Q86Y22 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms