Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRLQ86TD4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.67■□□□□ 0.42
SRLQ86TD4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRLQ86TD4 AC148477.5-201ENST00000625164 1645 ntBASIC17.67■□□□□ 0.42
SRLQ86TD4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.67■□□□□ 0.42
SRLQ86TD4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.67■□□□□ 0.42
SRLQ86TD4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.67■□□□□ 0.42
SRLQ86TD4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRLQ86TD4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRLQ86TD4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
SRLQ86TD4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRLQ86TD4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 AC004817.3-201ENST00000602957 2129 ntBASIC17.66■□□□□ 0.42
SRLQ86TD4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.66■□□□□ 0.42
SRLQ86TD4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.66■□□□□ 0.42
SRLQ86TD4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRLQ86TD4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.66■□□□□ 0.42
SRLQ86TD4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.66■□□□□ 0.42
SRLQ86TD4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
SRLQ86TD4 MTDHP4-201ENST00000600287 670 ntBASIC17.66■□□□□ 0.42
SRLQ86TD4 AL022326.1-202ENST00000641533 845 ntBASIC17.66■□□□□ 0.42
SRLQ86TD4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.66■□□□□ 0.42
SRLQ86TD4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
SRLQ86TD4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRLQ86TD4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 AC092364.2-201ENST00000596710 2692 ntBASIC17.65■□□□□ 0.42
SRLQ86TD4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SRLQ86TD4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.65■□□□□ 0.42
SRLQ86TD4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.65■□□□□ 0.42
SRLQ86TD4 RNPS1P1-201ENST00000507437 918 ntBASIC17.65■□□□□ 0.42
SRLQ86TD4 AC073648.2-201ENST00000510116 352 ntBASIC17.65■□□□□ 0.42
SRLQ86TD4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.65■□□□□ 0.42
SRLQ86TD4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.65■□□□□ 0.42
SRLQ86TD4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 AC138035.3-201ENST00000622706 2791 ntBASIC17.65■□□□□ 0.42
SRLQ86TD4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SRLQ86TD4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRLQ86TD4 AC046185.3-201ENST00000623228 1824 ntBASIC17.65■□□□□ 0.42
SRLQ86TD4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms