Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KHDC1Q4VXA5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
KHDC1Q4VXA5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 DBET-201ENST00000630918 3363 ntBASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 DUX4L17-201ENST00000557360 1267 ntBASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KHDC1Q4VXA5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC007967.2-201ENST00000432613 625 ntBASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 MIR4751-201ENST00000578027 74 ntBASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 AC002310.6-201ENST00000624451 1377 ntBASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KHDC1Q4VXA5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KHDC1Q4VXA5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KHDC1Q4VXA5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KHDC1Q4VXA5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KHDC1Q4VXA5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
KHDC1Q4VXA5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms