Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AL096865.1-201ENST00000606796 927 ntBASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AC099522.2-201ENST00000607001 744 ntBASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AC026120.1-201ENST00000611536 926 ntBASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AL627223.1-201ENST00000416693 442 ntBASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AL671277.1-201ENST00000429656 993 ntBASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AC140658.5-201ENST00000438532 169 ntBASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 AC092068.3-201ENST00000587894 2016 ntBASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144BQ3MJ40 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 HCG11-201ENST00000411553 5696 ntBASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 KRT8P48-201ENST00000515599 1220 ntBASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 AC107918.2-201ENST00000530817 355 ntBASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 AC007950.2-201ENST00000615045 2347 ntBASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144BQ3MJ40 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144BQ3MJ40 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC144BQ3MJ40 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144BQ3MJ40 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144BQ3MJ40 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144BQ3MJ40 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms