Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CBX1P83916 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 POM121L13P-201ENST00000422362 380 ntBASIC17.42■□□□□ 0.38
CBX1P83916 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.42■□□□□ 0.38
CBX1P83916 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.42■□□□□ 0.38
CBX1P83916 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 AC013726.1-201ENST00000563747 2285 ntBASIC17.42■□□□□ 0.38
CBX1P83916 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CBX1P83916 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 FRMD8P1-201ENST00000440433 1524 ntBASIC17.42■□□□□ 0.38
CBX1P83916 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX1P83916 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 OR2I1P-209ENST00000641730 5365 ntBASIC17.41■□□□□ 0.38
CBX1P83916 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CBX1P83916 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.41■□□□□ 0.38
CBX1P83916 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.41■□□□□ 0.38
CBX1P83916 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX1P83916 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.41■□□□□ 0.38
CBX1P83916 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.41■□□□□ 0.38
CBX1P83916 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX1P83916 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.41■□□□□ 0.38
CBX1P83916 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX1P83916 EGFEM1P-202ENST00000431685 1563 ntBASIC17.4■□□□□ 0.38
CBX1P83916 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX1P83916 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 AC087623.3-201ENST00000607047 1098 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms