Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 AGAP7P-201ENST00000582299 2062 ntBASIC12.53□□□□□ -0.4
HIST1H2BCP62807 AGAP14-201ENST00000624701 2060 ntBASIC12.53□□□□□ -0.4
HIST1H2BCP62807 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 GUSBP5-201ENST00000418136 578 ntBASIC12.53□□□□□ -0.4
HIST1H2BCP62807 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 KRT18P61-201ENST00000585825 1298 ntBASIC12.53□□□□□ -0.4
HIST1H2BCP62807 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H2BCP62807 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H2BCP62807 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 KRT18P23-201ENST00000435622 1283 ntBASIC12.52□□□□□ -0.41
HIST1H2BCP62807 AC123595.1-201ENST00000440769 1046 ntBASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 AC091390.4-202ENST00000476426 537 ntBASIC12.52□□□□□ -0.41
HIST1H2BCP62807 AC002558.1-201ENST00000488906 803 ntBASIC12.52□□□□□ -0.41
HIST1H2BCP62807 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H2BCP62807 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms