Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GFERP55789 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.84■□□□□ 0.13
GFERP55789 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
GFERP55789 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
GFERP55789 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
GFERP55789 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
GFERP55789 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.83■□□□□ 0.13
GFERP55789 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GFERP55789 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.83■□□□□ 0.13
GFERP55789 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GFERP55789 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.83■□□□□ 0.13
GFERP55789 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GFERP55789 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.83■□□□□ 0.12
GFERP55789 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
GFERP55789 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
GFERP55789 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.83■□□□□ 0.12
GFERP55789 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.83■□□□□ 0.12
GFERP55789 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.83■□□□□ 0.12
GFERP55789 UGT1A2P-201ENST00000454886 866 ntBASIC15.83■□□□□ 0.12
GFERP55789 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.83■□□□□ 0.12
GFERP55789 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
GFERP55789 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.83■□□□□ 0.12
GFERP55789 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
GFERP55789 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFERP55789 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.82■□□□□ 0.12
GFERP55789 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 LETM1P2-201ENST00000597330 2178 ntBASIC15.82■□□□□ 0.12
GFERP55789 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 RNF216P1-203ENST00000404404 2427 ntBASIC15.82■□□□□ 0.12
GFERP55789 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
GFERP55789 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.82■□□□□ 0.12
GFERP55789 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.82■□□□□ 0.12
GFERP55789 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.82■□□□□ 0.12
GFERP55789 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GFERP55789 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
GFERP55789 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.82■□□□□ 0.12
GFERP55789 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 GGT4P-201ENST00000623672 1708 ntBASIC15.82■□□□□ 0.12
GFERP55789 GPAA1P2-202ENST00000606848 1787 ntBASIC15.82■□□□□ 0.12
GFERP55789 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.82■□□□□ 0.12
GFERP55789 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFERP55789 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms