Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.86■□□□□ 0.13
NR1H2P55055 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 IFNL4P1-201ENST00000607083 540 ntBASIC15.86■□□□□ 0.13
NR1H2P55055 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 AL353692.3-201ENST00000407031 1396 ntBASIC15.86■□□□□ 0.13
NR1H2P55055 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 ALOX12P2-203ENST00000570921 1945 ntBASIC15.86■□□□□ 0.13
NR1H2P55055 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H2P55055 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H2P55055 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H2P55055 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H2P55055 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 AC013268.4-201ENST00000637413 2228 ntBASIC15.85■□□□□ 0.13
NR1H2P55055 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.85■□□□□ 0.13
NR1H2P55055 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 AC074051.2-201ENST00000565115 352 ntBASIC15.85■□□□□ 0.13
NR1H2P55055 AL592071.1-201ENST00000611956 408 ntBASIC15.85■□□□□ 0.13
NR1H2P55055 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NR1H2P55055 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
NR1H2P55055 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.85■□□□□ 0.13
NR1H2P55055 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 AC233702.3-201ENST00000578656 1387 ntBASIC15.85■□□□□ 0.13
NR1H2P55055 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
NR1H2P55055 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H2P55055 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H2P55055 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NR1H2P55055 AP000347.1-202ENST00000435868 847 ntBASIC15.84■□□□□ 0.13
NR1H2P55055 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.84■□□□□ 0.13
NR1H2P55055 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NR1H2P55055 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 FOSL1P1-201ENST00000511041 816 ntBASIC15.84■□□□□ 0.13
NR1H2P55055 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H2P55055 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.84■□□□□ 0.13
NR1H2P55055 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 AC124864.1-201ENST00000623408 392 ntBASIC15.84■□□□□ 0.13
NR1H2P55055 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H2P55055 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms