Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATP1B3P54709 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ATP1B3P54709 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATP1B3P54709 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATP1B3P54709 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATP1B3P54709 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.5□□□□□ -0.09
ATP1B3P54709 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.5□□□□□ -0.09
ATP1B3P54709 HLA-J-202ENST00000469281 1241 ntBASIC14.5□□□□□ -0.09
ATP1B3P54709 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 MTDHP3-201ENST00000594186 672 ntBASIC14.5□□□□□ -0.09
ATP1B3P54709 AC064862.7-201ENST00000604520 867 ntBASIC14.5□□□□□ -0.09
ATP1B3P54709 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 AL589182.2-201ENST00000619332 1049 ntBASIC14.5□□□□□ -0.09
ATP1B3P54709 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.5□□□□□ -0.09
ATP1B3P54709 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ATP1B3P54709 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.5□□□□□ -0.09
ATP1B3P54709 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATP1B3P54709 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ATP1B3P54709 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ATP1B3P54709 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.49□□□□□ -0.09
ATP1B3P54709 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.49□□□□□ -0.09
ATP1B3P54709 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.49□□□□□ -0.09
ATP1B3P54709 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.49□□□□□ -0.09
ATP1B3P54709 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.49□□□□□ -0.09
ATP1B3P54709 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 AL732292.2-201ENST00000609649 430 ntBASIC14.49□□□□□ -0.09
ATP1B3P54709 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.49□□□□□ -0.09
ATP1B3P54709 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.49□□□□□ -0.09
ATP1B3P54709 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.49□□□□□ -0.09
ATP1B3P54709 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.49□□□□□ -0.09
ATP1B3P54709 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATP1B3P54709 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ATP1B3P54709 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms