Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.76■□□□□ 0.59
USP11P51784 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 AC073439.1-201ENST00000624121 1774 ntBASIC18.76■□□□□ 0.59
USP11P51784 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
USP11P51784 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.75■□□□□ 0.59
USP11P51784 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.75■□□□□ 0.59
USP11P51784 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.75■□□□□ 0.59
USP11P51784 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.75■□□□□ 0.59
USP11P51784 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.75■□□□□ 0.59
USP11P51784 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP11P51784 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
USP11P51784 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP11P51784 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.74■□□□□ 0.59
USP11P51784 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.74■□□□□ 0.59
USP11P51784 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.74■□□□□ 0.59
USP11P51784 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 RPS8P6-201ENST00000426177 609 ntBASIC18.74■□□□□ 0.59
USP11P51784 PRYP6-201ENST00000514804 343 ntBASIC18.74■□□□□ 0.59
USP11P51784 IGHV3-62-201ENST00000520057 340 ntBASIC18.74■□□□□ 0.59
USP11P51784 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.74■□□□□ 0.59
USP11P51784 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.74■□□□□ 0.59
USP11P51784 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.74■□□□□ 0.59
USP11P51784 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.74■□□□□ 0.59
USP11P51784 AL596442.2-201ENST00000610240 980 ntBASIC18.74■□□□□ 0.59
USP11P51784 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.74■□□□□ 0.59
USP11P51784 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
USP11P51784 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.74■□□□□ 0.59
USP11P51784 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP11P51784 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
USP11P51784 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 AC069335.1-201ENST00000489972 472 ntBASIC18.73■□□□□ 0.59
USP11P51784 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.73■□□□□ 0.59
USP11P51784 AC105233.2-201ENST00000523697 349 ntBASIC18.73■□□□□ 0.59
USP11P51784 AF228730.5-201ENST00000530288 346 ntBASIC18.73■□□□□ 0.59
USP11P51784 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.73■□□□□ 0.59
USP11P51784 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 AC093520.2-201ENST00000561830 333 ntBASIC18.73■□□□□ 0.59
USP11P51784 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms