Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6CP48668 AC092364.2-201ENST00000596710 2692 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 AC026691.1-201ENST00000602502 2017 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6CP48668 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6CP48668 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6CP48668 AC073648.2-201ENST00000510116 352 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6CP48668 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6CP48668 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6CP48668 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6CP48668 AC092850.2-201ENST00000623821 2697 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT6CP48668 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 KRT8P39-201ENST00000396270 1433 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 GGT3P-204ENST00000453783 1664 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 AL513523.2-202ENST00000427283 2040 ntBASIC16.18■□□□□ 0.18
KRT6CP48668 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6CP48668 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT6CP48668 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 SLC25A6P2-201ENST00000497974 877 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 OR7E14P-202ENST00000530490 1290 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.17■□□□□ 0.18
KRT6CP48668 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 CLEC4GP1-201ENST00000596555 870 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 AP001350.2-201ENST00000625104 1094 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 SNX33P1-201ENST00000592116 1762 ntBASIC16.17■□□□□ 0.18
KRT6CP48668 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KRT6CP48668 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6CP48668 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT6CP48668 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6CP48668 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
KRT6CP48668 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6CP48668 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
KRT6CP48668 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6CP48668 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6CP48668 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
KRT6CP48668 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 AL671710.1-201ENST00000610245 2349 ntBASIC16.16■□□□□ 0.18
KRT6CP48668 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6CP48668 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms