Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 HLA-A-202ENST00000376806 1854 ntBASIC17.78■□□□□ 0.44
SSR1P43307 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
SSR1P43307 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.77■□□□□ 0.44
SSR1P43307 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.77■□□□□ 0.44
SSR1P43307 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.77■□□□□ 0.44
SSR1P43307 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.77■□□□□ 0.44
SSR1P43307 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.77■□□□□ 0.44
SSR1P43307 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.77■□□□□ 0.44
SSR1P43307 CLEC4GP1-201ENST00000596555 870 ntBASIC17.77■□□□□ 0.44
SSR1P43307 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 REXO1L6P-202ENST00000619970 1078 ntBASIC17.77■□□□□ 0.44
SSR1P43307 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.77■□□□□ 0.44
SSR1P43307 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSR1P43307 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SSR1P43307 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.77■□□□□ 0.43
SSR1P43307 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.77■□□□□ 0.43
SSR1P43307 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSR1P43307 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSR1P43307 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.76■□□□□ 0.43
SSR1P43307 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.76■□□□□ 0.43
SSR1P43307 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.76■□□□□ 0.43
SSR1P43307 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.76■□□□□ 0.43
SSR1P43307 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSR1P43307 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSR1P43307 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR1P43307 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSR1P43307 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 KRT8P49-201ENST00000604166 1432 ntBASIC17.75■□□□□ 0.43
SSR1P43307 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SSR1P43307 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms