Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
KRT20P35900 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 AC103702.1-201ENST00000548801 2630 ntBASIC15.9■□□□□ 0.14
KRT20P35900 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 AC022188.1-201ENST00000620960 1664 ntBASIC15.9■□□□□ 0.14
KRT20P35900 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
KRT20P35900 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.9■□□□□ 0.14
KRT20P35900 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.9■□□□□ 0.14
KRT20P35900 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 AL662844.1-201ENST00000546340 181 ntBASIC15.9■□□□□ 0.14
KRT20P35900 AL139424.1-201ENST00000607572 797 ntBASIC15.9■□□□□ 0.14
KRT20P35900 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT20P35900 AL773604.1-201ENST00000617417 272 ntBASIC15.9■□□□□ 0.14
KRT20P35900 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 AC107918.4-202ENST00000641623 219 ntBASIC15.9■□□□□ 0.14
KRT20P35900 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
KRT20P35900 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 EGFEM1P-202ENST00000431685 1563 ntBASIC15.9■□□□□ 0.14
KRT20P35900 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 AL513523.2-202ENST00000427283 2040 ntBASIC15.9■□□□□ 0.14
KRT20P35900 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 GPR89P-201ENST00000407924 1495 ntBASIC15.9■□□□□ 0.14
KRT20P35900 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT20P35900 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT20P35900 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT20P35900 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
KRT20P35900 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT20P35900 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 AP002469.2-201ENST00000531724 424 ntBASIC15.89■□□□□ 0.13
KRT20P35900 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT20P35900 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT20P35900 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT20P35900 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms