Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CLCN1P35523 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCN1P35523 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLCN1P35523 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 GUSBP12-201ENST00000513727 720 ntBASIC18.97■□□□□ 0.63
CLCN1P35523 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.97■□□□□ 0.63
CLCN1P35523 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCN1P35523 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
CLCN1P35523 AL353801.3-201ENST00000609898 542 ntBASIC18.97■□□□□ 0.63
CLCN1P35523 AC124864.1-201ENST00000623408 392 ntBASIC18.97■□□□□ 0.63
CLCN1P35523 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CLCN1P35523 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN1P35523 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLCN1P35523 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.96■□□□□ 0.63
CLCN1P35523 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 KRT8P26-201ENST00000534154 1276 ntBASIC18.96■□□□□ 0.63
CLCN1P35523 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.96■□□□□ 0.63
CLCN1P35523 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCN1P35523 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLCN1P35523 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCN1P35523 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCN1P35523 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCN1P35523 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCN1P35523 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCN1P35523 AC005840.4-201ENST00000541242 2494 ntBASIC18.95■□□□□ 0.62
CLCN1P35523 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CLCN1P35523 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCN1P35523 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCN1P35523 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCN1P35523 AC010460.3-201ENST00000511359 1579 ntBASIC18.95■□□□□ 0.62
CLCN1P35523 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms