Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN6P29350 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.82■□□□□ 0.12
PTPN6P29350 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN6P29350 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 BX640515.1-201ENST00000617215 977 ntBASIC15.82■□□□□ 0.12
PTPN6P29350 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN6P29350 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PTPN6P29350 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN6P29350 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN6P29350 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 KRT8P39-201ENST00000396270 1433 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 AL590627.1-203ENST00000421194 1026 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 IL9RP2-201ENST00000423948 1312 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 AC087163.2-201ENST00000457299 853 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 AC105339.3-201ENST00000560043 636 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 AL603832.2-201ENST00000566195 2125 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 AC006557.2-201ENST00000592985 1240 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN6P29350 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 AC120114.3-201ENST00000611923 658 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.81■□□□□ 0.12
PTPN6P29350 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN6P29350 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 AC116407.3-201ENST00000623905 1129 ntBASIC15.81■□□□□ 0.12
PTPN6P29350 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN6P29350 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN6P29350 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN6P29350 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN6P29350 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN6P29350 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN6P29350 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTPN6P29350 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 KRT18P27-201ENST00000427733 1299 ntBASIC15.8■□□□□ 0.12
PTPN6P29350 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms