Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.32□□□□□ -0.12
CD40P25942 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.32□□□□□ -0.12
CD40P25942 SPDYE7P-202ENST00000420373 878 ntBASIC14.32□□□□□ -0.12
CD40P25942 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40P25942 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40P25942 PRYP6-201ENST00000514804 343 ntBASIC14.32□□□□□ -0.12
CD40P25942 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40P25942 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.32□□□□□ -0.12
CD40P25942 AC073389.1-201ENST00000595595 795 ntBASIC14.32□□□□□ -0.12
CD40P25942 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD40P25942 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40P25942 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40P25942 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.31□□□□□ -0.12
CD40P25942 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 SPDYE14P-201ENST00000442619 822 ntBASIC14.31□□□□□ -0.12
CD40P25942 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 ALG1L8P-201ENST00000533887 760 ntBASIC14.31□□□□□ -0.12
CD40P25942 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.31□□□□□ -0.12
CD40P25942 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.31□□□□□ -0.12
CD40P25942 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD40P25942 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
CD40P25942 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms