Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A1P11836 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A1P11836 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.39■■□□□ 1.01
MS4A1P11836 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.39■■□□□ 1.01
MS4A1P11836 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.39■■□□□ 1.01
MS4A1P11836 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MS4A1P11836 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A1P11836 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MS4A1P11836 PMS2P1-201ENST00000431037 1228 ntBASIC21.39■■□□□ 1.01
MS4A1P11836 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.39■■□□□ 1.01
MS4A1P11836 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A1P11836 CYP2A7P1-201ENST00000595391 815 ntBASIC21.39■■□□□ 1.01
MS4A1P11836 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.39■■□□□ 1.01
MS4A1P11836 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A1P11836 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MS4A1P11836 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.39■■□□□ 1.01
MS4A1P11836 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A1P11836 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.39■■□□□ 1.01
MS4A1P11836 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.39■■□□□ 1.01
MS4A1P11836 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A1P11836 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
MS4A1P11836 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 ALOX12P2-203ENST00000570921 1945 ntBASIC21.38■■□□□ 1.01
MS4A1P11836 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.38■■□□□ 1.01
MS4A1P11836 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.38■■□□□ 1.01
MS4A1P11836 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.38■■□□□ 1.01
MS4A1P11836 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.38■■□□□ 1.01
MS4A1P11836 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.38■■□□□ 1.01
MS4A1P11836 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.38■■□□□ 1.01
MS4A1P11836 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 AP002414.3-201ENST00000589352 1468 ntBASIC21.38■■□□□ 1.01
MS4A1P11836 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
MS4A1P11836 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MS4A1P11836 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
MS4A1P11836 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 SLC22A20-204ENST00000530038 1673 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
MS4A1P11836 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
MS4A1P11836 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.37■■□□□ 1.01
MS4A1P11836 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC21.37■■□□□ 1.01
MS4A1P11836 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
MS4A1P11836 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.37■■□□□ 1.01
MS4A1P11836 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
MS4A1P11836 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.37■■□□□ 1.01
MS4A1P11836 AC079781.3-201ENST00000449110 356 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 AC012640.2-201ENST00000561606 901 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.37■■□□□ 1.01
MS4A1P11836 AL773604.1-201ENST00000617417 272 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 FAM215A-202ENST00000632077 792 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.37■■□□□ 1.01
MS4A1P11836 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 ME2P1-201ENST00000426028 1970 ntBASIC21.37■■□□□ 1.01
MS4A1P11836 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.37■■□□□ 1.01
MS4A1P11836 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MS4A1P11836 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MS4A1P11836 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.36■■□□□ 1.01
MS4A1P11836 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.36■■□□□ 1.01
MS4A1P11836 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.36■■□□□ 1.01
MS4A1P11836 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.36■■□□□ 1.01
MS4A1P11836 GGT3P-204ENST00000453783 1664 ntBASIC21.36■■□□□ 1.01
MS4A1P11836 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms