Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 AC107890.1-201ENST00000422478 521 ntBASIC13.01□□□□□ -0.33
CD28P10747 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.01□□□□□ -0.33
CD28P10747 AC055876.3-201ENST00000431496 288 ntBASIC13.01□□□□□ -0.33
CD28P10747 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.01□□□□□ -0.33
CD28P10747 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 SPDYE14P-201ENST00000442619 822 ntBASIC13.01□□□□□ -0.33
CD28P10747 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 IGHV3-42-201ENST00000520410 361 ntBASIC13.01□□□□□ -0.33
CD28P10747 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.01□□□□□ -0.33
CD28P10747 CYP2A7P1-201ENST00000595391 815 ntBASIC13.01□□□□□ -0.33
CD28P10747 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.01□□□□□ -0.33
CD28P10747 AC138649.4-201ENST00000612222 287 ntBASIC13.01□□□□□ -0.33
CD28P10747 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 MIR6080-201ENST00000617359 66 ntBASIC13.01□□□□□ -0.33
CD28P10747 AC008267.7-201ENST00000624570 1194 ntBASIC13.01□□□□□ -0.33
CD28P10747 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CD28P10747 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD28P10747 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 PRORSD1P-202ENST00000563365 2154 ntBASIC13.01□□□□□ -0.33
CD28P10747 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CD28P10747 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13□□□□□ -0.33
CD28P10747 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD28P10747 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CD28P10747 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CD28P10747 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 FO538757.1-201ENST00000623083 1397 ntBASIC13□□□□□ -0.33
CD28P10747 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13□□□□□ -0.33
CD28P10747 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 BAD-202ENST00000394531 631 ntTSL 3 BASIC13□□□□□ -0.33
CD28P10747 SPDYE7P-202ENST00000420373 878 ntBASIC13□□□□□ -0.33
CD28P10747 TREML5P-201ENST00000421694 576 ntBASIC13□□□□□ -0.33
CD28P10747 BASP1P1-201ENST00000430708 665 ntBASIC13□□□□□ -0.33
CD28P10747 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 ALG1L8P-201ENST00000533887 760 ntBASIC13□□□□□ -0.33
CD28P10747 BAD-207ENST00000544785 525 ntTSL 3 BASIC13□□□□□ -0.33
CD28P10747 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13□□□□□ -0.33
CD28P10747 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13□□□□□ -0.33
CD28P10747 AP000842.3-202ENST00000569238 1080 ntBASIC13□□□□□ -0.33
CD28P10747 MIR3909-201ENST00000579518 119 ntBASIC13□□□□□ -0.33
CD28P10747 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13□□□□□ -0.33
CD28P10747 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13□□□□□ -0.33
CD28P10747 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD28P10747 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD28P10747 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD28P10747 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13□□□□□ -0.33
CD28P10747 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CD28P10747 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CD28P10747 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms