Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CHGBP05060 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.92■□□□□ 0.78
CHGBP05060 AP000344.2-201ENST00000512987 629 ntBASIC19.92■□□□□ 0.78
CHGBP05060 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.92■□□□□ 0.78
CHGBP05060 SLC25A39P2-201ENST00000537614 270 ntBASIC19.92■□□□□ 0.78
CHGBP05060 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.92■□□□□ 0.78
CHGBP05060 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.92■□□□□ 0.78
CHGBP05060 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.92■□□□□ 0.78
CHGBP05060 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHGBP05060 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHGBP05060 PCDHB19P-201ENST00000570871 2371 ntBASIC19.92■□□□□ 0.78
CHGBP05060 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.92■□□□□ 0.78
CHGBP05060 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.91■□□□□ 0.78
CHGBP05060 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.91■□□□□ 0.78
CHGBP05060 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.91■□□□□ 0.78
CHGBP05060 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.91■□□□□ 0.78
CHGBP05060 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
CHGBP05060 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHGBP05060 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHGBP05060 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHGBP05060 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CHGBP05060 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHGBP05060 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.91■□□□□ 0.78
CHGBP05060 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.91■□□□□ 0.78
CHGBP05060 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CHGBP05060 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 AC142381.1-201ENST00000426099 345 ntBASIC19.9■□□□□ 0.78
CHGBP05060 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 AP000842.3-202ENST00000569238 1080 ntBASIC19.9■□□□□ 0.78
CHGBP05060 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CHGBP05060 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHGBP05060 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms