Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
VTNP04004 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.16■□□□□ 0.5
VTNP04004 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
VTNP04004 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VTNP04004 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
VTNP04004 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
VTNP04004 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
VTNP04004 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.15■□□□□ 0.5
VTNP04004 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.15■□□□□ 0.5
VTNP04004 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.15■□□□□ 0.5
VTNP04004 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTNP04004 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.14■□□□□ 0.5
VTNP04004 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VTNP04004 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 MIR661-201ENST00000384842 89 ntBASIC18.14■□□□□ 0.49
VTNP04004 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.14■□□□□ 0.49
VTNP04004 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.14■□□□□ 0.49
VTNP04004 AC138761.1-201ENST00000584393 385 ntBASIC18.14■□□□□ 0.49
VTNP04004 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 AC007967.4-201ENST00000614700 386 ntBASIC18.14■□□□□ 0.49
VTNP04004 SPDYE12P-201ENST00000618416 771 ntBASIC18.14■□□□□ 0.49
VTNP04004 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 RNF216P1-203ENST00000404404 2427 ntBASIC18.14■□□□□ 0.49
VTNP04004 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
VTNP04004 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTNP04004 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
VTNP04004 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 GGT4P-201ENST00000623672 1708 ntBASIC18.13■□□□□ 0.49
VTNP04004 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 GPAA1P2-202ENST00000606848 1787 ntBASIC18.13■□□□□ 0.49
VTNP04004 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 FAM220BP-201ENST00000377689 816 ntBASIC18.13■□□□□ 0.49
VTNP04004 AC236430.1-201ENST00000402231 743 ntBASIC18.13■□□□□ 0.49
VTNP04004 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 TSPY16P-201ENST00000449843 468 ntBASIC18.13■□□□□ 0.49
VTNP04004 AC098859.1-201ENST00000502915 1238 ntBASIC18.13■□□□□ 0.49
VTNP04004 RNA5SP410-201ENST00000516285 106 ntBASIC18.13■□□□□ 0.49
VTNP04004 AC027369.6-201ENST00000525520 931 ntBASIC18.13■□□□□ 0.49
VTNP04004 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.13■□□□□ 0.49
VTNP04004 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms