Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.59■□□□□ 0.41
ZBED1O96006 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZBED1O96006 RNU1-129P-201ENST00000384064 167 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.59■□□□□ 0.41
ZBED1O96006 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.59■□□□□ 0.41
ZBED1O96006 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.59■□□□□ 0.41
ZBED1O96006 HTR5BP-201ENST00000430851 1154 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 FAM58CP-201ENST00000435741 640 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 MKNK2P1-201ENST00000437526 628 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.59■□□□□ 0.41
ZBED1O96006 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 ALG1L5P-201ENST00000482043 771 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.59■□□□□ 0.41
ZBED1O96006 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.59■□□□□ 0.41
ZBED1O96006 AC112191.1-201ENST00000523689 701 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.59■□□□□ 0.41
ZBED1O96006 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.59■□□□□ 0.41
ZBED1O96006 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
ZBED1O96006 U1.21-201ENST00000580816 167 ntBASIC17.59■□□□□ 0.41
ZBED1O96006 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.59■□□□□ 0.41
ZBED1O96006 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.59■□□□□ 0.41
ZBED1O96006 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
ZBED1O96006 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ZBED1O96006 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.58■□□□□ 0.41
ZBED1O96006 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZBED1O96006 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZBED1O96006 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 AC002056.1-201ENST00000395613 760 ntBASIC17.58■□□□□ 0.4
ZBED1O96006 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.58■□□□□ 0.4
ZBED1O96006 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.58■□□□□ 0.4
ZBED1O96006 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.58■□□□□ 0.4
ZBED1O96006 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZBED1O96006 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.58■□□□□ 0.4
ZBED1O96006 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ZBED1O96006 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
ZBED1O96006 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
ZBED1O96006 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.58■□□□□ 0.4
ZBED1O96006 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZBED1O96006 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.57■□□□□ 0.4
ZBED1O96006 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.57■□□□□ 0.4
ZBED1O96006 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 AL671710.1-201ENST00000610245 2349 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 PMS2P4-201ENST00000412466 1052 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms