Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KRT33AO76009 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT33AO76009 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT33AO76009 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 PCDHB17P-201ENST00000539533 2393 ntBASIC15.17■□□□□ 0.02
KRT33AO76009 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 HLA-A-201ENST00000376802 1334 ntBASIC15.17■□□□□ 0.02
KRT33AO76009 AL590787.1-201ENST00000568856 1315 ntBASIC15.17■□□□□ 0.02
KRT33AO76009 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 AL596257.1-201ENST00000641463 2694 ntBASIC15.16■□□□□ 0.02
KRT33AO76009 AP002414.3-201ENST00000589352 1468 ntBASIC15.16■□□□□ 0.02
KRT33AO76009 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 PTCHD3P3-201ENST00000403073 906 ntBASIC15.16■□□□□ 0.02
KRT33AO76009 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.16■□□□□ 0.02
KRT33AO76009 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
KRT33AO76009 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT33AO76009 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT33AO76009 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT33AO76009 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.16■□□□□ 0.02
KRT33AO76009 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT33AO76009 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.15■□□□□ 0.02
KRT33AO76009 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT33AO76009 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT33AO76009 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
KRT33AO76009 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT33AO76009 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms