Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SCN2BO60939 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SCN2BO60939 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SCN2BO60939 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
SCN2BO60939 AC073621.1-201ENST00000392730 636 ntBASIC15.81■□□□□ 0.12
SCN2BO60939 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 AL596087.1-201ENST00000400979 1969 ntBASIC15.81■□□□□ 0.12
SCN2BO60939 SCARNA2-201ENST00000458748 420 ntBASIC15.81■□□□□ 0.12
SCN2BO60939 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.81■□□□□ 0.12
SCN2BO60939 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN2BO60939 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN2BO60939 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN2BO60939 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCN2BO60939 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
SCN2BO60939 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SCN2BO60939 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN2BO60939 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCN2BO60939 AC107918.4-202ENST00000641623 219 ntBASIC15.81■□□□□ 0.12
SCN2BO60939 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN2BO60939 AL139384.1-201ENST00000612143 3047 ntBASIC15.81■□□□□ 0.12
SCN2BO60939 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SCN2BO60939 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 LAGE3P1-201ENST00000425356 484 ntBASIC15.8■□□□□ 0.12
SCN2BO60939 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN2BO60939 SAPCD2P3-201ENST00000455031 850 ntBASIC15.8■□□□□ 0.12
SCN2BO60939 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN2BO60939 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.8■□□□□ 0.12
SCN2BO60939 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN2BO60939 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN2BO60939 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN2BO60939 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCN2BO60939 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN2BO60939 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.79■□□□□ 0.12
SCN2BO60939 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN2BO60939 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SCN2BO60939 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN2BO60939 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN2BO60939 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms