Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 AP002469.2-201ENST00000531724 424 ntBASIC15.92■□□□□ 0.14
PCDH7O60245 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 MIR7706-201ENST00000613747 67 ntBASIC15.92■□□□□ 0.14
PCDH7O60245 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH7O60245 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 CICP6-201ENST00000457191 2729 ntBASIC15.92■□□□□ 0.14
PCDH7O60245 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
PCDH7O60245 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH7O60245 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
PCDH7O60245 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
PCDH7O60245 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 AL031284.1-201ENST00000419297 478 ntBASIC15.91■□□□□ 0.14
PCDH7O60245 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH7O60245 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDH7O60245 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH7O60245 OR7E47P-204ENST00000575924 449 ntBASIC15.91■□□□□ 0.14
PCDH7O60245 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
PCDH7O60245 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 AL049840.3-201ENST00000602669 611 ntBASIC15.91■□□□□ 0.14
PCDH7O60245 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.91■□□□□ 0.14
PCDH7O60245 AC010654.1-201ENST00000615722 808 ntBASIC15.91■□□□□ 0.14
PCDH7O60245 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH7O60245 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH7O60245 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH7O60245 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms