Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.53□□□□□ -0.4
SNAI2O43623 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.53□□□□□ -0.4
SNAI2O43623 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 AC125634.1-201ENST00000438758 1403 ntBASIC12.53□□□□□ -0.4
SNAI2O43623 KRT8P10-201ENST00000450021 1447 ntBASIC12.53□□□□□ -0.4
SNAI2O43623 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 AL353593.2-201ENST00000602529 1483 ntBASIC12.53□□□□□ -0.4
SNAI2O43623 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SNAI2O43623 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 CICP4-201ENST00000447359 2812 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SNAI2O43623 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 AC009336.1-201ENST00000608941 1553 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 MTHFR-217ENST00000641820 1569 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.52□□□□□ -0.4
SNAI2O43623 AC097376.2-205ENST00000610159 5334 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 AC099063.4-201ENST00000641099 1602 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 AL645728.1-201ENST00000366221 2101 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SNAI2O43623 SNX18-202ENST00000343017 3140 ntBASIC12.52□□□□□ -0.4
SNAI2O43623 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNAI2O43623 AL009178.2-201ENST00000597278 2719 ntBASIC12.52□□□□□ -0.41
SNAI2O43623 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.52□□□□□ -0.41
SNAI2O43623 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.52□□□□□ -0.41
SNAI2O43623 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.52□□□□□ -0.41
SNAI2O43623 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.52□□□□□ -0.41
SNAI2O43623 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.52□□□□□ -0.41
SNAI2O43623 AL359075.1-203ENST00000462729 1002 ntBASIC12.52□□□□□ -0.41
SNAI2O43623 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SNAI2O43623 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNAI2O43623 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SNAI2O43623 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.52□□□□□ -0.41
SNAI2O43623 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNAI2O43623 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.52□□□□□ -0.41
SNAI2O43623 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.51□□□□□ -0.41
SNAI2O43623 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.51□□□□□ -0.41
SNAI2O43623 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SNAI2O43623 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.51□□□□□ -0.41
SNAI2O43623 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.51□□□□□ -0.41
SNAI2O43623 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
SNAI2O43623 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.51□□□□□ -0.41
SNAI2O43623 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SNAI2O43623 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNAI2O43623 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms