Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SGCEO43556 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.79□□□□□ -0.04
SGCEO43556 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SGCEO43556 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 TPM4P1-201ENST00000436100 807 ntBASIC14.79□□□□□ -0.04
SGCEO43556 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 AP002469.2-201ENST00000531724 424 ntBASIC14.79□□□□□ -0.04
SGCEO43556 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.79□□□□□ -0.04
SGCEO43556 AL160237.2-201ENST00000556165 472 ntBASIC14.79□□□□□ -0.04
SGCEO43556 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.79□□□□□ -0.04
SGCEO43556 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 AC008667.4-201ENST00000607370 168 ntBASIC14.79□□□□□ -0.04
SGCEO43556 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.79□□□□□ -0.04
SGCEO43556 FAM215A-202ENST00000632077 792 ntBASIC14.79□□□□□ -0.04
SGCEO43556 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SGCEO43556 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
SGCEO43556 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGCEO43556 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 PCDHA14-201ENST00000506751 2298 ntBASIC14.78□□□□□ -0.04
SGCEO43556 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SGCEO43556 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 AP002414.3-201ENST00000589352 1468 ntBASIC14.78□□□□□ -0.04
SGCEO43556 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SGCEO43556 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.78□□□□□ -0.04
SGCEO43556 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.78□□□□□ -0.04
SGCEO43556 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.78□□□□□ -0.04
SGCEO43556 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 AC012640.2-201ENST00000561606 901 ntBASIC14.78□□□□□ -0.04
SGCEO43556 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.78□□□□□ -0.04
SGCEO43556 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SGCEO43556 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGCEO43556 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms