Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AL645728.1-201ENST00000366221 2101 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 HLA-V-204ENST00000476601 1289 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AC022144.1-201ENST00000602255 1580 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AC013467.2-201ENST00000605472 835 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AC009118.2-201ENST00000613275 655 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SPTSSB-204ENST00000617024 1292 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 AC006277.1-201ENST00000624348 1610 ntBASIC19.21■□□□□ 0.67
USP17L11C9JVI0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP17L11C9JVI0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
USP17L11C9JVI0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AL035456.1-201ENST00000456064 1369 ntBASIC19.2■□□□□ 0.66
USP17L11C9JVI0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AC005915.1-201ENST00000624912 2018 ntBASIC19.2■□□□□ 0.66
USP17L11C9JVI0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.2■□□□□ 0.66
USP17L11C9JVI0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.2■□□□□ 0.66
USP17L11C9JVI0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
USP17L11C9JVI0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 AC073439.1-201ENST00000624121 1774 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 FAM220BP-201ENST00000377689 816 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 AL353705.2-201ENST00000428243 662 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 GAPDHP21-201ENST00000450301 1010 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 AP005018.1-201ENST00000525475 301 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 AC027307.3-201ENST00000594262 1100 ntBASIC19.19■□□□□ 0.66
USP17L11C9JVI0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms