Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.31■□□□□ 0.36
YJEFN3A6XGL0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YJEFN3A6XGL0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YJEFN3A6XGL0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AC027307.2-201ENST00000591252 911 ntBASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AC027612.4-201ENST00000605371 583 ntBASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 PCGF3-213ENST00000620529 1899 ntBASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 AC073439.1-201ENST00000624121 1774 ntBASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YJEFN3A6XGL0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 AC008267.7-201ENST00000624570 1194 ntBASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YJEFN3A6XGL0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.28■□□□□ 0.36
YJEFN3A6XGL0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms