Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AC104640.1-201ENST00000562617 2109 ntBASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC125634.1-201ENST00000438758 1403 ntBASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AL596087.1-201ENST00000400979 1969 ntBASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC002310.6-201ENST00000624451 1377 ntBASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KCNIP3Q9Y2W7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms