Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AL390719.2-201ENST00000606993 987 ntBASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AC125634.1-201ENST00000438758 1403 ntBASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 GGT4P-201ENST00000623672 1708 ntBASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AC022532.1-201ENST00000624563 1728 ntBASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 AL021920.2-201ENST00000624828 1351 ntBASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC006449.6-201ENST00000612330 2296 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC092597.1-201ENST00000487352 616 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC005332.3-201ENST00000589904 676 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AL138966.2-201ENST00000621997 464 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 GGT3P-204ENST00000453783 1664 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AP005117.1-202ENST00000581724 1908 ntBASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.68□□□□□ -0.22
RCL1Q9Y2P8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 AC013268.4-201ENST00000637413 2228 ntBASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms