Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 REXO1L9P-201ENST00000604264 2108 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 AC108725.1-201ENST00000495472 409 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 RHOQP1-201ENST00000555758 579 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 RPSAP52-203ENST00000622976 1023 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 KRT8P49-201ENST00000604166 1432 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 LYSMD4-203ENST00000378904 2122 ntBASIC19.97■□□□□ 0.79
ZC3H4Q9UPT8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 EGFEM1P-202ENST00000431685 1563 ntBASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 RNA5SP423-201ENST00000517127 109 ntBASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3H4Q9UPT8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 MIR1247-201ENST00000408206 136 ntBASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 AL589987.1-201ENST00000453380 819 ntBASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.95■□□□□ 0.78
ZC3H4Q9UPT8 AC026979.3-201ENST00000607315 403 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms