Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 FAM45BP-202ENST00000592932 1624 ntBASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 RNA5SP419-201ENST00000515908 135 ntBASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 IGHV3-52-201ENST00000519770 353 ntBASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 STK25P1-201ENST00000585406 838 ntBASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.06■□□□□ 0.16
CNOT11Q9UKZ1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 HLA-A-201ENST00000376802 1334 ntBASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AC003669.1-201ENST00000334569 611 ntBASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 KLF4P1-201ENST00000412782 1185 ntBASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 BX005266.1-201ENST00000473402 457 ntBASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AL773604.1-201ENST00000617417 272 ntBASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNOT11Q9UKZ1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 AC144831.1-201ENST00000573312 2656 ntBASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms