Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 KRT8P23-201ENST00000560090 1207 ntBASIC17.75■□□□□ 0.43
SIX4Q9UIU6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX4Q9UIU6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC093724.1-201ENST00000448659 1027 ntBASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC023141.5-201ENST00000458585 616 ntBASIC17.74■□□□□ 0.43
SIX4Q9UIU6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC009093.7-201ENST00000623853 1223 ntBASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIX4Q9UIU6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 PCDHA14-201ENST00000506751 2298 ntBASIC17.73■□□□□ 0.43
SIX4Q9UIU6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 IGHV3-62-201ENST00000520057 340 ntBASIC17.73■□□□□ 0.43
SIX4Q9UIU6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.73■□□□□ 0.43
SIX4Q9UIU6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 AC090340.1-201ENST00000620778 4980 ntBASIC17.73■□□□□ 0.43
SIX4Q9UIU6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX4Q9UIU6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.72■□□□□ 0.43
SIX4Q9UIU6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.72■□□□□ 0.43
SIX4Q9UIU6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms