Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 AC025580.3-201ENST00000617932 1424 ntBASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.33■□□□□ 0.04
UBQLN4Q9NRR5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 GGT4P-201ENST00000623672 1708 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 KRT19P2-202ENST00000557173 1012 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AC018845.2-201ENST00000568326 409 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AC140113.2-201ENST00000604370 208 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AL031055.1-201ENST00000606362 631 ntBASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN4Q9NRR5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 GPAA1P2-202ENST00000606848 1787 ntBASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AC020765.3-201ENST00000613051 740 ntBASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms