Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 AL512652.2-201ENST00000625156 1716 ntBASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 AP005117.1-201ENST00000584346 1413 ntBASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AL603832.2-201ENST00000566195 2125 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 PCED1CP-201ENST00000419887 785 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AP000867.3-201ENST00000524675 377 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AC012615.1-201ENST00000565797 1299 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AL591684.3-201ENST00000605187 298 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 AL031731.1-201ENST00000642131 2094 ntBASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE2Q9NRR3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC063926.3-201ENST00000624734 5658 ntBASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms