Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PMS2P4-201ENST00000412466 1052 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 GPX1P2-201ENST00000429271 606 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC140658.5-201ENST00000438532 169 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC060766.1-201ENST00000590824 627 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC010327.4-202ENST00000591484 748 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC021097.1-201ENST00000607902 574 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 MST1L-201ENST00000442552 2185 ntBASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.76■□□□□ 0.11
PRDM9Q9NQV7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AL512652.2-201ENST00000625156 1716 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 MKNK2P1-201ENST00000437526 628 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AC091917.2-201ENST00000505002 744 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AC112191.1-201ENST00000523689 701 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AC109635.5-201ENST00000533593 962 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 AP002472.1-201ENST00000577490 586 ntBASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRDM9Q9NQV7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms