Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 AC084018.2-201ENST00000613093 2607 ntBASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 AL355306.1-201ENST00000415580 579 ntBASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 AL671277.1-201ENST00000429656 993 ntBASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 AC134684.3-201ENST00000641758 218 ntBASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP13A1Q9HD20 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 RARRES2P8-201ENST00000566335 367 ntBASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP13A1Q9HD20 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 RPS8P6-201ENST00000426177 609 ntBASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP13A1Q9HD20 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms