Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 AL671277.2-201ENST00000458060 996 ntBASIC20.52■□□□□ 0.88
UPF2Q9HAU5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 AC006011.2-201ENST00000621313 1158 ntBASIC20.52■□□□□ 0.88
UPF2Q9HAU5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPF2Q9HAU5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UPF2Q9HAU5 AC097637.2-201ENST00000624096 1997 ntBASIC20.52■□□□□ 0.87
UPF2Q9HAU5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPF2Q9HAU5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPF2Q9HAU5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UPF2Q9HAU5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 GGT3P-204ENST00000453783 1664 ntBASIC20.51■□□□□ 0.87
UPF2Q9HAU5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 PMPCAP1-201ENST00000508114 1576 ntBASIC20.51■□□□□ 0.87
UPF2Q9HAU5 TP73-AS1-210ENST00000637775 1455 ntBASIC20.51■□□□□ 0.87
UPF2Q9HAU5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 KRT18P57-201ENST00000443599 1254 ntBASIC20.51■□□□□ 0.87
UPF2Q9HAU5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPF2Q9HAU5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 AC097493.4-201ENST00000641197 219 ntBASIC20.5■□□□□ 0.87
UPF2Q9HAU5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF2Q9HAU5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AC148477.5-201ENST00000625164 1645 ntBASIC20.49■□□□□ 0.87
UPF2Q9HAU5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms