Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.75■□□□□ 0.43
PACSIN1Q9BY11 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 AC091167.2-201ENST00000579581 588 ntBASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 AC012313.10-201ENST00000623509 926 ntBASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 GPAA1P2-202ENST00000606848 1787 ntBASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.74■□□□□ 0.43
PACSIN1Q9BY11 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms