Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM62Q9BVG3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM62Q9BVG3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIM62Q9BVG3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 TFAMP1-201ENST00000412727 736 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AC211486.1-202ENST00000416371 468 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 ADH5P3-201ENST00000433842 1137 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SPDYE11-202ENST00000450699 704 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AC211476.1-201ENST00000503899 468 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AL135744.1-201ENST00000565098 629 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SPDYE9P-201ENST00000570642 692 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SPDYE10P-202ENST00000612005 668 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SPDYE8P-202ENST00000612377 668 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 RNF216P1-203ENST00000404404 2427 ntBASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM62Q9BVG3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM62Q9BVG3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 PCGF3-213ENST00000620529 1899 ntBASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 AP000344.2-201ENST00000512987 629 ntBASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 LTB4R2-202ENST00000528054 3092 ntBASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM62Q9BVG3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms