Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 GGT3P-204ENST00000453783 1664 ntBASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AC106028.4-201ENST00000614509 607 ntBASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 Z92544.3-201ENST00000624747 417 ntBASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 PCDHA12-202ENST00000613593 2588 ntBASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 CYMP-203ENST00000474680 1263 ntBASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM47Q9BQJ4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM47Q9BQJ4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM47Q9BQJ4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM47Q9BQJ4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 AC093724.1-201ENST00000448659 1027 ntBASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 AC069262.1-201ENST00000539058 672 ntBASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 LTB4R2-202ENST00000528054 3092 ntBASIC19.26■□□□□ 0.67
TMEM47Q9BQJ4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms