Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.41■□□□□ 0.38
SMOQ99835 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.41■□□□□ 0.38
SMOQ99835 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.41■□□□□ 0.38
SMOQ99835 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.4■□□□□ 0.38
SMOQ99835 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.4■□□□□ 0.38
SMOQ99835 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.4■□□□□ 0.38
SMOQ99835 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.4■□□□□ 0.38
SMOQ99835 AC105233.2-201ENST00000523697 349 ntBASIC17.4■□□□□ 0.38
SMOQ99835 AF228730.5-201ENST00000530288 346 ntBASIC17.4■□□□□ 0.38
SMOQ99835 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.4■□□□□ 0.38
SMOQ99835 AC093028.1-201ENST00000622998 982 ntBASIC17.4■□□□□ 0.38
SMOQ99835 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 LINC00628-201ENST00000628516 1289 ntBASIC17.4■□□□□ 0.38
SMOQ99835 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMOQ99835 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.4■□□□□ 0.38
SMOQ99835 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMOQ99835 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMOQ99835 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMOQ99835 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.39■□□□□ 0.38
SMOQ99835 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMOQ99835 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
SMOQ99835 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMOQ99835 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.39■□□□□ 0.38
SMOQ99835 PCGF3-213ENST00000620529 1899 ntBASIC17.39■□□□□ 0.38
SMOQ99835 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMOQ99835 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 AC020916.1-201ENST00000587762 1774 ntBASIC17.39■□□□□ 0.37
SMOQ99835 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMOQ99835 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.39■□□□□ 0.37
SMOQ99835 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 RBPMS2P1-201ENST00000437762 623 ntBASIC17.39■□□□□ 0.37
SMOQ99835 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.39■□□□□ 0.37
SMOQ99835 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.39■□□□□ 0.37
SMOQ99835 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.39■□□□□ 0.37
SMOQ99835 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SMOQ99835 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMOQ99835 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.39■□□□□ 0.37
SMOQ99835 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMOQ99835 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMOQ99835 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.39■□□□□ 0.37
SMOQ99835 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms