Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL19Q99731 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CCL19Q99731 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL19Q99731 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL19Q99731 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL19Q99731 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL19Q99731 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCL19Q99731 BTBD7P1-201ENST00000447253 1453 ntBASIC13.98□□□□□ -0.17
CCL19Q99731 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL19Q99731 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCL19Q99731 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL19Q99731 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL19Q99731 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 AL391825.1-201ENST00000457671 1364 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL19Q99731 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL19Q99731 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 AL080243.2-201ENST00000418783 582 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 ARSEP1-201ENST00000420443 635 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL19Q99731 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 SERBP1P3-201ENST00000459980 809 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 RN7SL752P-201ENST00000463779 287 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 GIMAP3P-201ENST00000495150 836 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 AC011495.1-201ENST00000498085 584 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL19Q99731 AC004840.1-201ENST00000636359 365 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.97□□□□□ -0.17
CCL19Q99731 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL19Q99731 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL19Q99731 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL19Q99731 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCL19Q99731 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL19Q99731 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCL19Q99731 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL19Q99731 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL19Q99731 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCL19Q99731 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms