Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AC123567.1-201ENST00000548294 1261 ntBASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AC092337.1-201ENST00000568699 1129 ntBASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRAMP1Q96RY5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 AC022210.1-201ENST00000449856 793 ntBASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRAMP1Q96RY5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 MIR658-201ENST00000385210 100 ntBASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AC098850.1-201ENST00000419919 790 ntBASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 TTTY23B-201ENST00000442790 549 ntBASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AC093726.1-201ENST00000608064 963 ntBASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 AL645728.1-201ENST00000366221 2101 ntBASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.12■□□□□ 0.81
CRAMP1Q96RY5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 AL031731.1-201ENST00000642131 2094 ntBASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms