Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 AC092658.1-201ENST00000505836 891 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 SDHAP3-202ENST00000515467 728 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 SRD5A3P1-201ENST00000603021 949 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 TUBB7P-202ENST00000428444 1305 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AC234783.1-201ENST00000441761 496 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 MYCLP2-201ENST00000449268 967 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 TPRX2P-201ENST00000535362 881 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AP005482.1-201ENST00000563722 1273 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AL033527.5-202ENST00000641632 1098 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AC099398.1-201ENST00000567919 2776 ntBASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN4Q96NY8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN4Q96NY8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms